E0Z10_g9513 protein (Xylaria hypoxylon) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

E0Z10_g9513

WD_REPEATS_REGION domain-containing protein. (357 aa)

Predicted Functional Partners:

E0Z10_g3933

0.693

E0Z10_g1732

0.653

E0Z10_g9693

0.569

E0Z10_g1573

0.569

E0Z10_g1439

0.562

E0Z10_g9247

0.560

E0Z10_g2983

0.545

E0Z10_g3876

0.498

E0Z10_g2296

0.498

E0Z10_g8172

0.497

Your Current Organism:

Xylaria hypoxylon

NCBI taxonomy Id: 37992
Other names: X. hypoxylon

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E0Z10_g1439	E0Z10_g1732	A0A4Z0Z715	A0A4Z0YRK8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.501
E0Z10_g1439	E0Z10_g2296	A0A4Z0Z715	A0A4Z0ZAF1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.483
E0Z10_g1439	E0Z10_g3876	A0A4Z0Z715	A0A4Z0Z298	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.483
E0Z10_g1439	E0Z10_g3933	A0A4Z0Z715	A0A4Z0Z273	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.489
E0Z10_g1439	E0Z10_g8172	A0A4Z0Z715	A0A4Z0Y9R0	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.483
E0Z10_g1439	E0Z10_g9247	A0A4Z0Z715	A0A4Z0YHP8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.483
E0Z10_g1439	E0Z10_g9513	A0A4Z0Z715	A0A4Z0YIZ1	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.562
E0Z10_g1573	E0Z10_g9513	A0A4Z0YRY6	A0A4Z0YIZ1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.569
E0Z10_g1732	E0Z10_g1439	A0A4Z0YRK8	A0A4Z0Z715	Uncharacterized protein; Belongs to the DEAD box helicase family.	WD_REPEATS_REGION domain-containing protein.	0.501
E0Z10_g1732	E0Z10_g2296	A0A4Z0YRK8	A0A4Z0ZAF1	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.402
E0Z10_g1732	E0Z10_g2983	A0A4Z0YRK8	A0A4Z0YPM7	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.418
E0Z10_g1732	E0Z10_g3876	A0A4Z0YRK8	A0A4Z0Z298	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.420
E0Z10_g1732	E0Z10_g3933	A0A4Z0YRK8	A0A4Z0Z273	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.945
E0Z10_g1732	E0Z10_g9247	A0A4Z0YRK8	A0A4Z0YHP8	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.687
E0Z10_g1732	E0Z10_g9513	A0A4Z0YRK8	A0A4Z0YIZ1	Uncharacterized protein; Belongs to the DEAD box helicase family.	WD_REPEATS_REGION domain-containing protein.	0.653
E0Z10_g2296	E0Z10_g1439	A0A4Z0ZAF1	A0A4Z0Z715	Uncharacterized protein; Belongs to the DEAD box helicase family.	WD_REPEATS_REGION domain-containing protein.	0.483
E0Z10_g2296	E0Z10_g1732	A0A4Z0ZAF1	A0A4Z0YRK8	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.402
E0Z10_g2296	E0Z10_g3933	A0A4Z0ZAF1	A0A4Z0Z273	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.688
E0Z10_g2296	E0Z10_g9513	A0A4Z0ZAF1	A0A4Z0YIZ1	Uncharacterized protein; Belongs to the DEAD box helicase family.	WD_REPEATS_REGION domain-containing protein.	0.498
E0Z10_g2983	E0Z10_g1732	A0A4Z0YPM7	A0A4Z0YRK8	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.418