STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E0Z10_g9938Zn(2)-C6 fungal-type domain-containing protein. (698 aa)    
Predicted Functional Partners:
E0Z10_g7610
WD_REPEATS_REGION domain-containing protein.
   
 0.589
E0Z10_g3875
Ipi1_N domain-containing protein.
    
 0.584
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.571
E0Z10_g6899
CLP1_P domain-containing protein.
    
  0.501
E0Z10_g8274
CP-type G domain-containing protein.
   
  0.500
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.491
E0Z10_g8959
WSC domain-containing protein.
    
 0.488
E0Z10_g1887
Ribosomal_L2_C domain-containing protein.
    
  0.486
E0Z10_g658
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
    
  0.469
E0Z10_g10643
Uncharacterized protein.
   
  0.468
Your Current Organism:
Xylaria hypoxylon
NCBI taxonomy Id: 37992
Other names: X. hypoxylon
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