STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
E0Z10_g1942NUC173 domain-containing protein. (1291 aa)    
Predicted Functional Partners:
E0Z10_g10287
WD_REPEATS_REGION domain-containing protein.
   
 
 0.997
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.997
E0Z10_g3324
Bms1-type G domain-containing protein.
   
 
 0.997
E0Z10_g10612
Uncharacterized protein.
   
 
 0.996
E0Z10_g6458
BP28CT domain-containing protein.
   
 
 0.996
E0Z10_g5830
Uncharacterized protein.
   
 
 0.996
E0Z10_g7068
Uncharacterized protein.
   
 
 0.995
E0Z10_g1240
CBF domain-containing protein.
   
 
 0.995
E0Z10_g1116
CBF domain-containing protein.
   
 
 0.995
E0Z10_g1897
Bms1-type G domain-containing protein.
   
 
 0.995
Your Current Organism:
Xylaria hypoxylon
NCBI taxonomy Id: 37992
Other names: X. hypoxylon
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