Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
E0Z10_g8756ABC transporter domain-containing protein. (451 aa)    
Predicted Functional Partners:
E0Z10_g6188
ABC transporter domain-containing protein.
  
 
  0.543
E0Z10_g3712
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
 
 0.494
E0Z10_g10118
Uncharacterized protein.
   
 0.433
E0Z10_g9291
Protein kinase domain-containing protein.
   
 0.433
E0Z10_g3496
Pkinase_fungal domain-containing protein.
   
 0.433
Your Current Organism:
Xylaria hypoxylon
NCBI taxonomy Id: 37992
Other names: X. hypoxylon
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