E0Z10_g7146 protein (Xylaria hypoxylon) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

E0Z10_g7146

Uncharacterized protein. (318 aa)

Predicted Functional Partners:

E0Z10_g5128

0.968

E0Z10_g1161

0.968

E0Z10_g6938

0.961

E0Z10_g216

0.953

E0Z10_g5877

0.952

E0Z10_g535

0.951

E0Z10_g3911

0.944

E0Z10_g4703

0.943

E0Z10_g6217

0.930

E0Z10_g6216

0.930

Your Current Organism:

Xylaria hypoxylon

NCBI taxonomy Id: 37992
Other names: X. hypoxylon

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E0Z10_g1161	E0Z10_g216	A0A4Z0ZFH2	A0A4Z0Z9J3	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.815
E0Z10_g1161	E0Z10_g3911	A0A4Z0ZFH2	A0A4Z0YMB2	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	ERCC4 domain-containing protein.	0.719
E0Z10_g1161	E0Z10_g4703	A0A4Z0ZFH2	A0A4Z0Z3E5	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.746
E0Z10_g1161	E0Z10_g5128	A0A4Z0ZFH2	A0A4Z0YH47	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.928
E0Z10_g1161	E0Z10_g535	A0A4Z0ZFH2	A0A4Z0Z7E0	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	0.733
E0Z10_g1161	E0Z10_g5877	A0A4Z0ZFH2	A0A4Z0YTZ5	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.824
E0Z10_g1161	E0Z10_g6216	A0A4Z0ZFH2	A0A4Z0YTV3	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Vezatin domain-containing protein.	0.955
E0Z10_g1161	E0Z10_g6217	A0A4Z0ZFH2	A0A4Z0YET6	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.955
E0Z10_g1161	E0Z10_g6938	A0A4Z0ZFH2	A0A4Z0YQZ0	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	SMP-LTD domain-containing protein.	0.986
E0Z10_g1161	E0Z10_g7146	A0A4Z0ZFH2	A0A4Z0YR34	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.968
E0Z10_g216	E0Z10_g1161	A0A4Z0Z9J3	A0A4Z0ZFH2	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.815
E0Z10_g216	E0Z10_g3911	A0A4Z0Z9J3	A0A4Z0YMB2	Uncharacterized protein.	ERCC4 domain-containing protein.	0.982
E0Z10_g216	E0Z10_g4703	A0A4Z0Z9J3	A0A4Z0Z3E5	Uncharacterized protein.	Uncharacterized protein.	0.982
E0Z10_g216	E0Z10_g5128	A0A4Z0Z9J3	A0A4Z0YH47	Uncharacterized protein.	Uncharacterized protein.	0.978
E0Z10_g216	E0Z10_g535	A0A4Z0Z9J3	A0A4Z0Z7E0	Uncharacterized protein.	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	0.986
E0Z10_g216	E0Z10_g5877	A0A4Z0Z9J3	A0A4Z0YTZ5	Uncharacterized protein.	Uncharacterized protein.	0.983
E0Z10_g216	E0Z10_g6216	A0A4Z0Z9J3	A0A4Z0YTV3	Uncharacterized protein.	Vezatin domain-containing protein.	0.957
E0Z10_g216	E0Z10_g6217	A0A4Z0Z9J3	A0A4Z0YET6	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.957
E0Z10_g216	E0Z10_g6938	A0A4Z0Z9J3	A0A4Z0YQZ0	Uncharacterized protein.	SMP-LTD domain-containing protein.	0.957
E0Z10_g216	E0Z10_g7146	A0A4Z0Z9J3	A0A4Z0YR34	Uncharacterized protein.	Uncharacterized protein.	0.953