STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E0Z10_g9720LCCL domain-containing protein. (659 aa)    
Predicted Functional Partners:
E0Z10_g8380
Uncharacterized protein.
 
      0.803
E0Z10_g9622
CN hydrolase domain-containing protein.
   
    0.575
E0Z10_g3032
Fungal_trans domain-containing protein.
   
    0.575
E0Z10_g2118
Uncharacterized protein.
   
    0.521
E0Z10_g6146
DUF2415 domain-containing protein.
   
    0.478
E0Z10_g4479
CN hydrolase domain-containing protein.
   
    0.467
E0Z10_g1223
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
   
    0.418
Your Current Organism:
Xylaria hypoxylon
NCBI taxonomy Id: 37992
Other names: X. hypoxylon
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