E0Z10_g6308 protein (Xylaria hypoxylon) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

E0Z10_g6308

Uncharacterized protein. (202 aa)

Predicted Functional Partners:

E0Z10_g3115

0.972

E0Z10_g9667

0.968

E0Z10_g2850

0.954

E0Z10_g7696

0.954

E0Z10_g6501

0.953

E0Z10_g6736

0.950

E0Z10_g9465

0.943

E0Z10_g9575

0.942

E0Z10_g9086

0.941

E0Z10_g9281

0.929

Your Current Organism:

Xylaria hypoxylon

NCBI taxonomy Id: 37992
Other names: X. hypoxylon

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E0Z10_g2850	E0Z10_g3115	A0A4Z0YNK0	A0A4Z0Z2Q6	Uncharacterized protein.	C2H2-type domain-containing protein.	0.983
E0Z10_g2850	E0Z10_g6308	A0A4Z0YNK0	A0A4Z0YR43	Uncharacterized protein.	Uncharacterized protein.	0.954
E0Z10_g2850	E0Z10_g6501	A0A4Z0YNK0	A0A4Z0Z0R8	Uncharacterized protein.	Sec8_exocyst domain-containing protein.	0.999
E0Z10_g2850	E0Z10_g6736	A0A4Z0YNK0	A0A4Z0YDE3	Uncharacterized protein.	Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.998
E0Z10_g2850	E0Z10_g7696	A0A4Z0YNK0	A0A4Z0YRE3	Uncharacterized protein.	Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.	0.999
E0Z10_g2850	E0Z10_g9086	A0A4Z0YNK0	A0A4Z0YI59	Uncharacterized protein.	Exocyst complex protein EXO70; Involved in the secretory pathway as part of the exocyst complex which tethers secretory vesicles to the sites of exocytosis. Also plays a role in the assembly of the exocyst. Belongs to the EXO70 family.	0.999
E0Z10_g2850	E0Z10_g9465	A0A4Z0YNK0	A0A4Z0YNT9	Uncharacterized protein.	Uncharacterized protein.	0.999
E0Z10_g2850	E0Z10_g9575	A0A4Z0YNK0	A0A4Z0YRP7	Uncharacterized protein.	Sec3-PIP2_bind domain-containing protein.	0.999
E0Z10_g2850	E0Z10_g9667	A0A4Z0YNK0	A0A4Z0Y804	Uncharacterized protein.	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	0.643
E0Z10_g3115	E0Z10_g2850	A0A4Z0Z2Q6	A0A4Z0YNK0	C2H2-type domain-containing protein.	Uncharacterized protein.	0.983
E0Z10_g3115	E0Z10_g6308	A0A4Z0Z2Q6	A0A4Z0YR43	C2H2-type domain-containing protein.	Uncharacterized protein.	0.972
E0Z10_g3115	E0Z10_g6501	A0A4Z0Z2Q6	A0A4Z0Z0R8	C2H2-type domain-containing protein.	Sec8_exocyst domain-containing protein.	0.983
E0Z10_g3115	E0Z10_g6736	A0A4Z0Z2Q6	A0A4Z0YDE3	C2H2-type domain-containing protein.	Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.990
E0Z10_g3115	E0Z10_g7696	A0A4Z0Z2Q6	A0A4Z0YRE3	C2H2-type domain-containing protein.	Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.	0.982
E0Z10_g3115	E0Z10_g9086	A0A4Z0Z2Q6	A0A4Z0YI59	C2H2-type domain-containing protein.	Exocyst complex protein EXO70; Involved in the secretory pathway as part of the exocyst complex which tethers secretory vesicles to the sites of exocytosis. Also plays a role in the assembly of the exocyst. Belongs to the EXO70 family.	0.896
E0Z10_g3115	E0Z10_g9281	A0A4Z0Z2Q6	A0A4Z0Y612	C2H2-type domain-containing protein.	Uncharacterized protein.	0.480
E0Z10_g3115	E0Z10_g9465	A0A4Z0Z2Q6	A0A4Z0YNT9	C2H2-type domain-containing protein.	Uncharacterized protein.	0.913
E0Z10_g3115	E0Z10_g9575	A0A4Z0Z2Q6	A0A4Z0YRP7	C2H2-type domain-containing protein.	Sec3-PIP2_bind domain-containing protein.	0.943
E0Z10_g3115	E0Z10_g9667	A0A4Z0Z2Q6	A0A4Z0Y804	C2H2-type domain-containing protein.	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	0.864
E0Z10_g6308	E0Z10_g2850	A0A4Z0YR43	A0A4Z0YNK0	Uncharacterized protein.	Uncharacterized protein.	0.954