STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
E0Z10_g8694Uncharacterized protein. (461 aa)    
Predicted Functional Partners:
E0Z10_g4398
Uncharacterized protein.
    
 0.955
E0Z10_g5135
Ribonuclease P protein subunit.
   
 0.954
E0Z10_g6637
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.937
E0Z10_g10475
Uncharacterized protein.
    
  0.915
E0Z10_g5883
Uncharacterized protein.
   
 0.810
E0Z10_g5145
SOR_SNZ domain-containing protein; Belongs to the PdxS/SNZ family.
     
  0.789
E0Z10_g4001
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
     
  0.613
E0Z10_g9713
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
     
  0.594
E0Z10_g4229
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
     
  0.594
E0Z10_g2002
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
     
  0.594
Your Current Organism:
Xylaria hypoxylon
NCBI taxonomy Id: 37992
Other names: X. hypoxylon
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