Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
E0Z10_g7675Uncharacterized protein. (266 aa)    
Predicted Functional Partners:
E0Z10_g7719
YTH domain-containing protein.
   
 0.994
E0Z10_g3411
CID domain-containing protein.
    
 0.989
E0Z10_g5153
Fip1 domain-containing protein.
   
 0.987
E0Z10_g9108
Uncharacterized protein.
    
 0.973
E0Z10_g8317
Uncharacterized protein.
   
 0.943
E0Z10_g8830
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.932
E0Z10_g2535
RRM domain-containing protein.
   
 0.931
E0Z10_g1107
DUF3453 domain-containing protein.
     
 0.920
E0Z10_g1052
WD_REPEATS_REGION domain-containing protein.
     
 0.896
CLP1
mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.
   
 0.890
Your Current Organism:
Xylaria hypoxylon
NCBI taxonomy Id: 37992
Other names: X. hypoxylon
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