E0Z10_g2103 protein (Xylaria hypoxylon) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

E0Z10_g2103

Uncharacterized protein. (290 aa)

Predicted Functional Partners:

E0Z10_g4850

0.478

E0Z10_g11018

0.473

E0Z10_g9686

0.451

E0Z10_g8182

0.446

E0Z10_g4377

0.446

E0Z10_g9700

0.437

E0Z10_g9573

0.434

E0Z10_g3803

0.434

E0Z10_g2462

0.434

E0Z10_g8912

0.429

Your Current Organism:

Xylaria hypoxylon

NCBI taxonomy Id: 37992
Other names: X. hypoxylon

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E0Z10_g11018	E0Z10_g2103	A0A4Z0XXM6	A0A4Z0YRN1	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.	Uncharacterized protein.	0.473
E0Z10_g11018	E0Z10_g4850	A0A4Z0XXM6	A0A4Z0YVB2	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.976
E0Z10_g2103	E0Z10_g11018	A0A4Z0YRN1	A0A4Z0XXM6	Uncharacterized protein.	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.	0.473
E0Z10_g2103	E0Z10_g2462	A0A4Z0YRN1	A0A4Z0ZC73	Uncharacterized protein.	Fe-ADH domain-containing protein.	0.434
E0Z10_g2103	E0Z10_g3803	A0A4Z0YRN1	A0A4Z0YL09	Uncharacterized protein.	Uncharacterized protein.	0.434
E0Z10_g2103	E0Z10_g4377	A0A4Z0YRN1	A0A4Z0YYW9	Uncharacterized protein.	FSH1 domain-containing protein.	0.446
E0Z10_g2103	E0Z10_g4850	A0A4Z0YRN1	A0A4Z0YVB2	Uncharacterized protein.	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.478
E0Z10_g2103	E0Z10_g8182	A0A4Z0YRN1	A0A4Z0YKF8	Uncharacterized protein.	DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.	0.446
E0Z10_g2103	E0Z10_g8912	A0A4Z0YRN1	A0A4Z0YKS6	Uncharacterized protein.	Aspartate aminotransferase.	0.429
E0Z10_g2103	E0Z10_g9573	A0A4Z0YRN1	A0A4Z0YK26	Uncharacterized protein.	Fe-ADH domain-containing protein.	0.434
E0Z10_g2103	E0Z10_g9686	A0A4Z0YRN1	A0A4Z0YGJ7	Uncharacterized protein.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.451
E0Z10_g2103	E0Z10_g9700	A0A4Z0YRN1	A0A4Z0YK40	Uncharacterized protein.	Uncharacterized protein.	0.437
E0Z10_g2462	E0Z10_g2103	A0A4Z0ZC73	A0A4Z0YRN1	Fe-ADH domain-containing protein.	Uncharacterized protein.	0.434
E0Z10_g2462	E0Z10_g9686	A0A4Z0ZC73	A0A4Z0YGJ7	Fe-ADH domain-containing protein.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.780
E0Z10_g3803	E0Z10_g2103	A0A4Z0YL09	A0A4Z0YRN1	Uncharacterized protein.	Uncharacterized protein.	0.434
E0Z10_g3803	E0Z10_g9686	A0A4Z0YL09	A0A4Z0YGJ7	Uncharacterized protein.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.780
E0Z10_g4377	E0Z10_g2103	A0A4Z0YYW9	A0A4Z0YRN1	FSH1 domain-containing protein.	Uncharacterized protein.	0.446
E0Z10_g4377	E0Z10_g8182	A0A4Z0YYW9	A0A4Z0YKF8	FSH1 domain-containing protein.	DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.	0.830
E0Z10_g4850	E0Z10_g11018	A0A4Z0YVB2	A0A4Z0XXM6	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.	0.976
E0Z10_g4850	E0Z10_g2103	A0A4Z0YVB2	A0A4Z0YRN1	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Uncharacterized protein.	0.478