STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E0Z10_g6107Uncharacterized protein. (1177 aa)    
Predicted Functional Partners:
E0Z10_g10749
Uncharacterized protein.
   
 0.998
E0Z10_g10812
Uncharacterized protein.
    
 0.975
E0Z10_g1418
Uncharacterized protein.
    
 0.975
E0Z10_g7944
C2H2-type domain-containing protein.
    
 0.957
E0Z10_g731
Uncharacterized protein.
    
 0.950
E0Z10_g6760
Myb_DNA-bind_7 domain-containing protein.
   
 0.948
E0Z10_g8830
Cleavage and polyadenylation specificity factor subunit 2.
    
   0.946
E0Z10_g2799
CPSF_A domain-containing protein.
    
   0.943
E0Z10_g8317
Uncharacterized protein.
   
   0.927
CLP1
mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.
    
 
 0.927
Your Current Organism:
Xylaria hypoxylon
NCBI taxonomy Id: 37992
Other names: X. hypoxylon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.