STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E0Z10_g2115Uncharacterized protein. (591 aa)    
Predicted Functional Partners:
E0Z10_g5106
Uncharacterized protein.
   
   0.947
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.904
E0Z10_g4391
Uncharacterized protein.
   
 
 0.902
E0Z10_g9473
Uncharacterized protein.
   
 
 0.898
E0Z10_g3528
RNA helicase.
   
   0.885
E0Z10_g7572
Uncharacterized protein.
   
 
 0.879
E0Z10_g6487
WD_REPEATS_REGION domain-containing protein.
   
  
 0.875
E0Z10_g7159
Uncharacterized protein.
   
 
 0.866
E0Z10_g5830
Uncharacterized protein.
   
 
 0.865
E0Z10_g10287
WD_REPEATS_REGION domain-containing protein.
   
  
 0.864
Your Current Organism:
Xylaria hypoxylon
NCBI taxonomy Id: 37992
Other names: X. hypoxylon
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