Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
E0Z10_g1678S10_plectin domain-containing protein. (175 aa)    
Predicted Functional Partners:
E0Z10_g10001
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
 0.999
E0Z10_g6940
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
   
 0.999
E0Z10_g4229
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 0.999
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.999
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 0.999
E0Z10_g4880
Uncharacterized protein.
   
 0.999
E0Z10_g4967
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.999
E0Z10_g708
Ribosomal_S10 domain-containing protein.
   
 0.999
E0Z10_g754
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
   
 0.999
E0Z10_g5826
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 0.998
Your Current Organism:
Xylaria hypoxylon
NCBI taxonomy Id: 37992
Other names: X. hypoxylon
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