STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E0Z10_g1653Uncharacterized protein. (942 aa)    
Predicted Functional Partners:
E0Z10_g5178
TAFII55_N domain-containing protein.
    
 
 0.932
E0Z10_g6441
Uncharacterized protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 
 0.867
E0Z10_g5680
Histone H3; Belongs to the histone H3 family.
    
 
 0.824
E0Z10_g1632
Uncharacterized protein.
   
 
 0.753
E0Z10_g5299
SANT_DAMP1_like domain-containing protein.
    
 
 0.735
E0Z10_g2088
DUF3591 domain-containing protein.
    
 
 0.673
E0Z10_g265
Histone H2A; Belongs to the histone H2A family.
    
 
 0.670
E0Z10_g3934
Uncharacterized protein.
    
 
 0.653
E0Z10_g2644
Uncharacterized protein.
    
 
 0.640
E0Z10_g9915
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 
 0.597
Your Current Organism:
Xylaria hypoxylon
NCBI taxonomy Id: 37992
Other names: X. hypoxylon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.