E0Z10_g9515 protein (Xylaria hypoxylon) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

E0Z10_g9515

Uncharacterized protein. (422 aa)

Predicted Functional Partners:

E0Z10_g4703

0.582

E0Z10_g7289

0.554

E0Z10_g3911

0.489

E0Z10_g5135

0.486

E0Z10_g10475

0.480

E0Z10_g2659

0.480

E0Z10_g4398

0.480

E0Z10_g5883

0.478

E0Z10_g1804

0.477

E0Z10_g2628

0.471

Your Current Organism:

Xylaria hypoxylon

NCBI taxonomy Id: 37992
Other names: X. hypoxylon

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E0Z10_g10475	E0Z10_g2628	A0A4Z0YEG3	A0A4Z0YQ88	Uncharacterized protein.	Kri1_C domain-containing protein.	0.979
E0Z10_g10475	E0Z10_g2659	A0A4Z0YEG3	A0A4Z0Z3S9	Uncharacterized protein.	Uncharacterized protein.	0.998
E0Z10_g10475	E0Z10_g3911	A0A4Z0YEG3	A0A4Z0YMB2	Uncharacterized protein.	ERCC4 domain-containing protein.	0.540
E0Z10_g10475	E0Z10_g4398	A0A4Z0YEG3	A0A4Z0Z436	Uncharacterized protein.	Uncharacterized protein.	0.998
E0Z10_g10475	E0Z10_g5135	A0A4Z0YEG3	A0A4Z0YUI1	Uncharacterized protein.	Ribonuclease P protein subunit.	0.998
E0Z10_g10475	E0Z10_g5883	A0A4Z0YEG3	A0A4Z0YS84	Uncharacterized protein.	Uncharacterized protein.	0.997
E0Z10_g10475	E0Z10_g9515	A0A4Z0YEG3	A0A4Z0YRV7	Uncharacterized protein.	Uncharacterized protein.	0.480
E0Z10_g1804	E0Z10_g3911	A0A4Z0Z625	A0A4Z0YMB2	MPN domain-containing protein.	ERCC4 domain-containing protein.	0.840
E0Z10_g1804	E0Z10_g4703	A0A4Z0Z625	A0A4Z0Z3E5	MPN domain-containing protein.	Uncharacterized protein.	0.937
E0Z10_g1804	E0Z10_g7289	A0A4Z0Z625	A0A4Z0YSP7	MPN domain-containing protein.	ERCC4 domain-containing protein.	0.946
E0Z10_g1804	E0Z10_g9515	A0A4Z0Z625	A0A4Z0YRV7	MPN domain-containing protein.	Uncharacterized protein.	0.477
E0Z10_g2628	E0Z10_g10475	A0A4Z0YQ88	A0A4Z0YEG3	Kri1_C domain-containing protein.	Uncharacterized protein.	0.979
E0Z10_g2628	E0Z10_g2659	A0A4Z0YQ88	A0A4Z0Z3S9	Kri1_C domain-containing protein.	Uncharacterized protein.	0.979
E0Z10_g2628	E0Z10_g4398	A0A4Z0YQ88	A0A4Z0Z436	Kri1_C domain-containing protein.	Uncharacterized protein.	0.978
E0Z10_g2628	E0Z10_g5135	A0A4Z0YQ88	A0A4Z0YUI1	Kri1_C domain-containing protein.	Ribonuclease P protein subunit.	0.977
E0Z10_g2628	E0Z10_g5883	A0A4Z0YQ88	A0A4Z0YS84	Kri1_C domain-containing protein.	Uncharacterized protein.	0.920
E0Z10_g2628	E0Z10_g9515	A0A4Z0YQ88	A0A4Z0YRV7	Kri1_C domain-containing protein.	Uncharacterized protein.	0.471
E0Z10_g2659	E0Z10_g10475	A0A4Z0Z3S9	A0A4Z0YEG3	Uncharacterized protein.	Uncharacterized protein.	0.998
E0Z10_g2659	E0Z10_g2628	A0A4Z0Z3S9	A0A4Z0YQ88	Uncharacterized protein.	Kri1_C domain-containing protein.	0.979
E0Z10_g2659	E0Z10_g3911	A0A4Z0Z3S9	A0A4Z0YMB2	Uncharacterized protein.	ERCC4 domain-containing protein.	0.540