Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
E0Z10_g9496DJ-1_PfpI domain-containing protein. (288 aa)    
Predicted Functional Partners:
E0Z10_g8909
Tryptophan synthase.
  
 
  0.886
E0Z10_g5072
Sod_Cu domain-containing protein.
  
 0.846
E0Z10_g6138
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
  
 0.846
E0Z10_g6870
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
  
 
 0.803
E0Z10_g1389
Ubiquitin-like domain-containing protein.
   
  0.690
E0Z10_g8433
SGL domain-containing protein.
  
 
  0.611
E0Z10_g7565
Phosphatase tensin-type domain-containing protein.
    
 
 0.603
E0Z10_g7178
Nudix hydrolase domain-containing protein.
     
  0.590
E0Z10_g10088
Ubiquitin-like domain-containing protein.
  
 
  0.588
E0Z10_g4008
Triosephosphate isomerase.
  
 
 0.586
Your Current Organism:
Xylaria hypoxylon
NCBI taxonomy Id: 37992
Other names: X. hypoxylon
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