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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E0Z10_g2074Uncharacterized protein. (336 aa)    
Predicted Functional Partners:
E0Z10_g5098
RRM domain-containing protein.
   
 0.996
E0Z10_g2123
Uncharacterized protein.
  
 
 
 0.990
E0Z10_g9128
FHA domain-containing protein.
   
 0.987
E0Z10_g2116
Uncharacterized protein.
    
 
 0.983
E0Z10_g1802
Uncharacterized protein.
    
 
 0.982
E0Z10_g5338
RRM domain-containing protein.
    
 
 0.980
E0Z10_g6497
MFAP1 domain-containing protein.
   
   0.973
E0Z10_g1027
MI domain-containing protein.
   
 
 0.962
E0Z10_g9460
PPIase cyclophilin-type domain-containing protein.
    
 0.959
E0Z10_g4094
Uncharacterized protein.
    
 
 0.958
Your Current Organism:
Xylaria hypoxylon
NCBI taxonomy Id: 37992
Other names: X. hypoxylon
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