E0Z10_g1063 protein (Xylaria hypoxylon) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

E0Z10_g1063

Uncharacterized protein. (388 aa)

Predicted Functional Partners:

E0Z10_g3791

0.735

E0Z10_g1437

0.729

E0Z10_g5643

0.678

E0Z10_g1101

0.675

E0Z10_g435

0.637

E0Z10_g4575

0.627

E0Z10_g1221

0.626

E0Z10_g412

0.586

E0Z10_g3899

0.537

E0Z10_g4430

0.537

Your Current Organism:

Xylaria hypoxylon

NCBI taxonomy Id: 37992
Other names: X. hypoxylon

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E0Z10_g1063	E0Z10_g1101	A0A4Z0YUI2	A0A4Z0YU96	Uncharacterized protein.	Nitroreductase domain-containing protein.	0.675
E0Z10_g1063	E0Z10_g1221	A0A4Z0YUI2	A0A4Z0Z5N9	Uncharacterized protein.	Tyrosinase_Cu-bd domain-containing protein.	0.626
E0Z10_g1063	E0Z10_g1437	A0A4Z0YUI2	A0A4Z0YS91	Uncharacterized protein.	Tyrosinase_Cu-bd domain-containing protein.	0.729
E0Z10_g1063	E0Z10_g3791	A0A4Z0YUI2	A0A4Z0Z8S2	Uncharacterized protein.	Uncharacterized protein.	0.735
E0Z10_g1063	E0Z10_g3899	A0A4Z0YUI2	A0A4Z0Z0E1	Uncharacterized protein.	Uncharacterized protein.	0.537
E0Z10_g1063	E0Z10_g412	A0A4Z0YUI2	A0A4Z0ZF02	Uncharacterized protein.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.586
E0Z10_g1063	E0Z10_g435	A0A4Z0YUI2	A0A4Z0Z7P2	Uncharacterized protein.	Tyrosinase_Cu-bd domain-containing protein.	0.637
E0Z10_g1063	E0Z10_g4430	A0A4Z0YUI2	A0A4Z0Z0S0	Uncharacterized protein.	Uncharacterized protein.	0.537
E0Z10_g1063	E0Z10_g4575	A0A4Z0YUI2	A0A4Z0YK01	Uncharacterized protein.	Tyrosinase_Cu-bd domain-containing protein.	0.627
E0Z10_g1063	E0Z10_g5643	A0A4Z0YUI2	A0A4Z0Z0G8	Uncharacterized protein.	Uncharacterized protein.	0.678
E0Z10_g1101	E0Z10_g1063	A0A4Z0YU96	A0A4Z0YUI2	Nitroreductase domain-containing protein.	Uncharacterized protein.	0.675
E0Z10_g1101	E0Z10_g1221	A0A4Z0YU96	A0A4Z0Z5N9	Nitroreductase domain-containing protein.	Tyrosinase_Cu-bd domain-containing protein.	0.404
E0Z10_g1101	E0Z10_g3791	A0A4Z0YU96	A0A4Z0Z8S2	Nitroreductase domain-containing protein.	Uncharacterized protein.	0.575
E0Z10_g1101	E0Z10_g5643	A0A4Z0YU96	A0A4Z0Z0G8	Nitroreductase domain-containing protein.	Uncharacterized protein.	0.545
E0Z10_g1221	E0Z10_g1063	A0A4Z0Z5N9	A0A4Z0YUI2	Tyrosinase_Cu-bd domain-containing protein.	Uncharacterized protein.	0.626
E0Z10_g1221	E0Z10_g1101	A0A4Z0Z5N9	A0A4Z0YU96	Tyrosinase_Cu-bd domain-containing protein.	Nitroreductase domain-containing protein.	0.404
E0Z10_g1221	E0Z10_g3791	A0A4Z0Z5N9	A0A4Z0Z8S2	Tyrosinase_Cu-bd domain-containing protein.	Uncharacterized protein.	0.433
E0Z10_g1221	E0Z10_g3899	A0A4Z0Z5N9	A0A4Z0Z0E1	Tyrosinase_Cu-bd domain-containing protein.	Uncharacterized protein.	0.404
E0Z10_g1221	E0Z10_g412	A0A4Z0Z5N9	A0A4Z0ZF02	Tyrosinase_Cu-bd domain-containing protein.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.586
E0Z10_g1221	E0Z10_g4430	A0A4Z0Z5N9	A0A4Z0Z0S0	Tyrosinase_Cu-bd domain-containing protein.	Uncharacterized protein.	0.404