STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK48983.1Threonine dehydrogenase. (405 aa)    
Predicted Functional Partners:
SDL63687.1
Alcohol dehydrogenase, propanol-preferring.
 
 
0.873
SDL84056.1
Alcohol dehydrogenase.
  
 
 
0.812
SDL20438.1
NAD(P)H-flavin reductase; Belongs to the globin family.
  
 
  0.812
SDL61725.1
Threonine dehydratase.
   
 
  0.809
SDL36961.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.758
SDK89937.1
2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
  
  
 
0.722
SDK88402.1
Threonine dehydrogenase.
  
  
  0.718
SDK94150.1
2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
  
  
 
0.712
SDL04171.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
 0.704
SDL66267.1
Hypothetical protein.
  
  
 
0.694
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.