Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDK54789.1 | SDK54806.1 | SAMN05216298_0498 | SAMN05216298_0499 | Probable non-F420 flavinoid oxidoreductase. | Maltose alpha-D-glucosyltransferase/ alpha-amylase. | 0.620 |
SDK54789.1 | SDK83233.1 | SAMN05216298_0498 | SAMN05216298_1560 | Probable non-F420 flavinoid oxidoreductase. | FMN reductase. | 0.726 |
SDK54789.1 | SDK83385.1 | SAMN05216298_0498 | SAMN05216298_1570 | Probable non-F420 flavinoid oxidoreductase. | Sulfonate transport system permease protein. | 0.663 |
SDK54789.1 | SDK83396.1 | SAMN05216298_0498 | SAMN05216298_1571 | Probable non-F420 flavinoid oxidoreductase. | Sulfonate transport system substrate-binding protein. | 0.677 |
SDK54789.1 | SDK83415.1 | SAMN05216298_0498 | SAMN05216298_1573 | Probable non-F420 flavinoid oxidoreductase. | FMN reductase. | 0.709 |
SDK54789.1 | SDL04171.1 | SAMN05216298_0498 | SAMN05216298_2427 | Probable non-F420 flavinoid oxidoreductase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.631 |
SDK54789.1 | SDL54024.1 | SAMN05216298_0498 | SAMN05216298_4284 | Probable non-F420 flavinoid oxidoreductase. | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | 0.653 |
SDK54789.1 | SDL54038.1 | SAMN05216298_0498 | SAMN05216298_4285 | Probable non-F420 flavinoid oxidoreductase. | NitT/TauT family transport system substrate-binding protein. | 0.675 |
SDK54789.1 | SDL58857.1 | SAMN05216298_0498 | SAMN05216298_4388 | Probable non-F420 flavinoid oxidoreductase. | Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.613 |
SDK54789.1 | SDL58905.1 | SAMN05216298_0498 | SAMN05216298_4390 | Probable non-F420 flavinoid oxidoreductase. | Sulfite reductase (ferredoxin); Manually curated; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.651 |
SDK54806.1 | SDK54789.1 | SAMN05216298_0499 | SAMN05216298_0498 | Maltose alpha-D-glucosyltransferase/ alpha-amylase. | Probable non-F420 flavinoid oxidoreductase. | 0.620 |
SDK83233.1 | SDK54789.1 | SAMN05216298_1560 | SAMN05216298_0498 | FMN reductase. | Probable non-F420 flavinoid oxidoreductase. | 0.726 |
SDK83233.1 | SDK83385.1 | SAMN05216298_1560 | SAMN05216298_1570 | FMN reductase. | Sulfonate transport system permease protein. | 0.820 |
SDK83233.1 | SDK83396.1 | SAMN05216298_1560 | SAMN05216298_1571 | FMN reductase. | Sulfonate transport system substrate-binding protein. | 0.844 |
SDK83233.1 | SDK83415.1 | SAMN05216298_1560 | SAMN05216298_1573 | FMN reductase. | FMN reductase. | 0.914 |
SDK83233.1 | SDL54024.1 | SAMN05216298_1560 | SAMN05216298_4284 | FMN reductase. | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | 0.825 |
SDK83233.1 | SDL54038.1 | SAMN05216298_1560 | SAMN05216298_4285 | FMN reductase. | NitT/TauT family transport system substrate-binding protein. | 0.844 |
SDK83233.1 | SDL58857.1 | SAMN05216298_1560 | SAMN05216298_4388 | FMN reductase. | Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.824 |
SDK83233.1 | SDL58905.1 | SAMN05216298_1560 | SAMN05216298_4390 | FMN reductase. | Sulfite reductase (ferredoxin); Manually curated; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.814 |
SDK83385.1 | SDK54789.1 | SAMN05216298_1570 | SAMN05216298_0498 | Sulfonate transport system permease protein. | Probable non-F420 flavinoid oxidoreductase. | 0.663 |
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