STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK59167.1Glycosyl-hydrolase 97 N-terminal. (849 aa)    
Predicted Functional Partners:
SDK59093.1
Alpha-galactosidase.
 
  
  0.873
SDK59130.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
     0.827
SDK59111.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
     0.816
SDK59154.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.816
SDK59073.1
Aldose 1-epimerase.
       0.773
SDL09502.1
Alpha-1,6-glucosidases, pullulanase-type; Belongs to the glycosyl hydrolase 13 family.
    
 0.712
SDL08233.1
Alpha galactosidase A.
 
  
  0.708
SDL76267.1
alpha-D-xyloside xylohydrolase; Belongs to the glycosyl hydrolase 31 family.
    
  0.682
SDK54806.1
Maltose alpha-D-glucosyltransferase/ alpha-amylase.
 
   
  0.681
SDK94356.1
Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family.
 
     0.660
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.