STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK59488.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (325 aa)    
Predicted Functional Partners:
SDK59500.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.981
SDK59461.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.970
SDK59579.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  
 
0.906
SDK91295.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.870
SDK94318.1
Putative aldouronate transport system permease protein.
  
  0.870
SDL76458.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.870
SDK61336.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.869
SDK91337.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 
  0.869
SDK92520.1
Putative aldouronate transport system permease protein.
  
  0.869
SDK94297.1
Putative aldouronate transport system substrate-binding protein.
 
  0.828
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.