STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK59579.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (303 aa)    
Predicted Functional Partners:
SDK59550.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.970
SDK59592.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.952
SDK59488.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  
 
0.906
SDL34459.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
  0.884
SDL61738.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  0.877
SDK86623.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.847
SDK62266.1
Multiple sugar transport system permease protein.
 
  0.844
SDL58623.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.840
SDK89083.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.835
SDL84381.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.830
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.