STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK60813.1Signal transduction histidine kinase. (434 aa)    
Predicted Functional Partners:
SDK60789.1
Two component transcriptional regulator, LuxR family.
   0.942
SDL08122.1
Two component transcriptional regulator, LuxR family.
 
   0.825
SDL70291.1
Two component transcriptional regulator, LuxR family.
 
   0.825
SDK92724.1
Two component transcriptional regulator, LuxR family.
 
   0.824
SDL35077.1
Two component transcriptional regulator, LuxR family.
 
   0.822
SDK67318.1
Two component transcriptional regulator, LuxR family.
 
   0.820
SDL09110.1
Signal transduction histidine kinase.
  
  0.814
SDL83299.1
Signal transduction histidine kinase.
  
  
  0.753
SDK80658.1
Signal transduction histidine kinase.
  
  
  0.744
SDL07127.1
Signal transduction histidine kinase.
  
  
  0.739
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.