STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK60874.1Hypothetical protein. (484 aa)    
Predicted Functional Partners:
SDK60922.1
Gas vesicle protein.
 
     0.959
SDK60901.1
Putative Holin-X, holin superfamily III.
 
     0.957
SDK57066.1
Glutamate synthase (NADH) large subunit.
   
 
 0.752
SDL62389.1
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase.
  
  
 0.745
SDL04171.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
 0.736
SDL18327.1
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component.
  
 0.732
SDL05354.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
   
  0.688
SDL58202.1
Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
   
  0.688
SDL58215.1
Assimilatory nitrate reductase (NADH) beta subunit.
   
  0.688
SDL75654.1
Bacterioferritin-associated ferredoxin.
   
  0.688
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.