STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK62374.1Transcriptional regulator, ArsR family. (114 aa)    
Predicted Functional Partners:
SDK62355.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
    0.906
SDK62385.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
       0.773
SDL20760.1
Helix-turn-helix domain-containing protein.
  
     0.769
SDL82032.1
Transcriptional regulator, ArsR family.
  
     0.727
SDL23203.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
    0.639
SDL33253.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
    0.578
SDK62337.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
       0.526
SDK62266.1
Multiple sugar transport system permease protein.
       0.481
SDK62293.1
Multiple sugar transport system permease protein/arabinogalactan oligomer / maltooligosaccharide transport system permease protein/N,N'-diacetylchitobiose transport system permease protein.
       0.481
SDK62426.1
Phage shock protein C (PspC) family protein.
  
    0.481
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.