STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK62572.1Transcriptional regulator, TetR family. (207 aa)    
Predicted Functional Partners:
SDK88884.1
Transcriptional regulator, TetR family.
  
     0.699
SDK92705.1
Transcriptional regulator, TetR family.
  
     0.684
SDK78945.1
Transcriptional regulator, TetR family.
  
     0.658
SDK58542.1
Transcriptional regulator, TetR family.
  
     0.586
SDK62581.1
FMN-dependent NADH-azoreductase.
       0.532
SDK61113.1
Transcriptional regulator, TetR family.
  
     0.502
SDL16255.1
Transcriptional regulator, TetR family.
  
     0.467
SDL07814.1
Sulfotransferase family protein.
  
     0.426
SDK94828.1
Sulfotransferase family protein.
  
     0.423
SDK56115.1
Transcriptional regulator, TetR family.
  
     0.421
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.