STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK64707.1Purine-cytosine permease; Belongs to the purine-cytosine permease (2.A.39) family. (467 aa)    
Predicted Functional Partners:
SDK64683.1
Sugar or nucleoside kinase, ribokinase family.
 
     0.941
SDK64725.1
ADP-ribosylglycohydrolase.
 
     0.916
SDK64741.1
GntR family transcriptional regulator.
 
    0.904
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
   
    0.751
carB
Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.
   
    0.680
carA
Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family.
   
    0.632
SDL04875.1
Bacteriophage replication gene A protein (GPA).
  
     0.528
SDL07509.1
Purine-nucleoside phosphorylase.
 
      0.444
SDK64777.1
L-ribulose 5-phosphate 4-epimerase.
       0.441
SDL03628.1
Uracil phosphoribosyltransferase; Belongs to the UPRTase family.
   
  
 0.428
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.