STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK79978.1DNA-binding transcriptional regulator, GntR family. (228 aa)    
Predicted Functional Partners:
SDK58854.1
Transcriptional regulator, GntR family.
  
     0.775
SDL63109.1
DNA-binding transcriptional regulator, GntR family.
  
     0.774
SDL18833.1
Transcriptional regulator, GntR family.
  
     0.773
SDK94232.1
Transcriptional regulator, GntR family.
  
  
 0.743
SDK90963.1
DNA-binding transcriptional regulator, FadR family.
  
  
 0.736
SDL01994.1
DNA-binding transcriptional regulator, FadR family.
  
  
 0.642
SDK94399.1
DNA-binding transcriptional regulator, FadR family.
  
  
 0.606
SDK79990.1
DNA-binding transcriptional regulator, MerR family.
       0.584
SDK62236.1
Transcriptional regulator, GntR family.
  
  
 0.511
SDL18281.1
Proline racemase; Belongs to the proline racemase family.
 
     0.450
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.