STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK87022.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (318 aa)    
Predicted Functional Partners:
SDK87010.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  0.995
SDK87046.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
   0.965
SDK87066.1
Glycosyl hydrolases family 35; Belongs to the glycosyl hydrolase 35 family.
 
    0.857
SDK83597.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
   0.854
SDK85769.1
Multiple sugar transport system permease protein.
 
   0.854
SDL83579.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
   0.853
SDK67652.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
   0.850
SDK59111.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
   0.849
SDK58938.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
   0.848
SDK88032.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
   0.848
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.