STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK87066.1Glycosyl hydrolases family 35; Belongs to the glycosyl hydrolase 35 family. (849 aa)    
Predicted Functional Partners:
SDK87010.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.921
SDK87046.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
     0.900
SDK87022.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
    0.857
SDL08233.1
Alpha galactosidase A.
  
 
  0.844
SDL70014.1
Carboxypeptidase C (cathepsin A).
    
  0.780
SDK87086.1
Transcriptional regulator, MarR family.
 
     0.754
SDK56870.1
Beta-galactosidase.
  
 
  0.699
SDK94279.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
  
 
  0.699
SDK89700.1
6-phospho-beta-glucosidase.
    
  0.647
SDL09502.1
Alpha-1,6-glucosidases, pullulanase-type; Belongs to the glycosyl hydrolase 13 family.
     
 0.644
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.