STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK89603.1Peptide/nickel transport system permease protein. (280 aa)    
Predicted Functional Partners:
SDK89581.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
    0.978
SDK89560.1
Peptide/nickel transport system ATP-binding protein.
    0.973
SDK89616.1
Peptide/nickel transport system permease protein.
 
 0.969
SDK89633.1
Peptide/nickel transport system substrate-binding protein.
 
  0.964
SDL05979.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.919
SDL75448.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.918
SDL75473.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.907
SDK91663.1
Peptide/nickel transport system ATP-binding protein.
 
 
  0.906
SDL34829.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.906
SDL16566.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain-containing protein; Belongs to the ABC transporter superfamily.
 
 
  0.904
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.