STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL03361.1ABC-2 type transport system permease protein. (253 aa)    
Predicted Functional Partners:
SDL03372.1
ABC-2 type transport system ATP-binding protein.
 
    0.952
SDL63502.1
ABC-2 type transport system ATP-binding protein.
  
    0.784
SDL76413.1
Oleandomycin transport system ATP-binding protein.
  
    0.784
SDL59178.1
ABC-2 type transport system ATP-binding protein.
  
    0.780
SDK66533.1
Oleandomycin transport system ATP-binding protein.
  
    0.775
SDL09906.1
ABC-2 type transport system ATP-binding protein.
  
    0.755
SDK87320.1
ABC-2 type transport system ATP-binding protein.
  
    0.726
SDL03390.1
Transcriptional regulator PadR-like family protein.
 
     0.700
SDL58416.1
ABC-2 type transport system permease protein.
  
  
  0.566
SDL63518.1
ABC-2 type transport system permease protein.
  
  
 
0.564
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.