STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL06367.1Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component. (417 aa)    
Predicted Functional Partners:
SDL06397.1
Monosaccharide ABC transporter membrane protein, CUT2 family.
      
0.658
SDL06412.1
Protein of unknown function.
       0.536
SDL06431.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase.
       0.533
SDL06453.1
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
       0.532
SDK91008.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
   
  0.418
SDK92917.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
   
  0.418
SDL38580.1
Simple sugar transport system substrate-binding protein.
   
  0.418
SDL63756.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
   
  0.418
SDL73049.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
   
  0.418
SDL06482.1
Hypothetical protein.
       0.401
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.