STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL15987.1Serine protease inhibitor; Belongs to the serpin family. (400 aa)    
Predicted Functional Partners:
SDK68292.1
Hypothetical protein.
   
  0.820
SDL09740.1
Trypsin.
   
  0.820
SDL09757.1
Trypsin.
   
  0.820
SDL70581.1
ATPase family associated with various cellular activities (AAA).
  
 
  0.808
SDL82375.1
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA).
    
  0.788
SDK53099.1
Cell division protein SufI.
    
  0.788
SDL16007.1
Serine protease inhibitor; Belongs to the serpin family.
 
    
0.780
SDL34112.1
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
    
  0.777
SDK66892.1
Membrane alanyl aminopeptidase Metallo peptidase. MEROPS family M01.
    
  0.751
SDL02493.1
Hypothetical protein.
    
  0.751
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.