STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL21193.1Putative ABC transport system ATP-binding protein. (259 aa)    
Predicted Functional Partners:
SDL01728.1
Putative ABC transport system permease protein.
  0.982
SDL17140.1
Putative ABC transport system permease protein.
  0.980
SDL34685.1
Putative ABC transport system permease protein.
  0.978
SDL21173.1
Putative ABC transport system permease protein.
 
  0.949
SDK89581.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    
0.895
SDK56574.1
ATP-binding cassette, subfamily B.
 
     
0.876
SDL76669.1
ATP-binding cassette, subfamily B.
 
    
0.862
SDK82035.1
Putative ABC transport system permease protein; Non-canonical start codon; manually curated.
 
  0.859
SDL69761.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
   
  0.859
SDL54096.1
ATP-binding cassette, subfamily B.
 
     
0.795
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.