STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL25528.1NADP-dependent aldehyde dehydrogenase. (478 aa)    
Predicted Functional Partners:
SDL25546.1
5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family.
 
 
  0.960
SDL25498.1
D-glucarate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
  0.887
SDK57066.1
Glutamate synthase (NADH) large subunit.
  
 
 0.881
SDK86071.1
Urea carboxylase.
   
 
 0.841
SDL76947.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.750
SDL18281.1
Proline racemase; Belongs to the proline racemase family.
 
 
  0.737
SDL36961.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
   
 0.734
SDK61029.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.727
SDL58562.1
2-oxoglutarate dehydrogenase E1 component.
   
 
 0.723
SDL10616.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
   
 0.716
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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