STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL33539.1DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit. (200 aa)    
Predicted Functional Partners:
SDL33563.1
Ferredoxin-NADP reductase.
 
  
  0.954
SDL76028.1
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor.
   
 0.899
SDL53031.1
Sulfate adenylyltransferase.
     
 0.787
SDL04171.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
 0.720
SDL33518.1
Sulfotransferase family protein.
       0.613
SDL01066.1
Adenylyltransferase and sulfurtransferase.
  
  
 0.550
SDL20438.1
NAD(P)H-flavin reductase; Belongs to the globin family.
  
 
 0.506
SDL33478.1
L-glyceraldehyde 3-phosphate reductase.
  
    0.411
SDL33500.1
Nitroreductase; Belongs to the flavin oxidoreductase frp family.
  
    0.410
SDL61192.1
5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
   
   0.405
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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