STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL34772.1Peptide/nickel transport system substrate-binding protein. (580 aa)    
Predicted Functional Partners:
SDL34789.1
Peptide/nickel transport system permease protein.
 0.973
SDL34806.1
Peptide/nickel transport system permease protein.
 0.962
SDL34829.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.924
SDL53875.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
 0.880
SDL34842.1
Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.876
SDL16528.1
Peptide/nickel transport system permease protein.
 0.822
SDL47150.1
Peptide/nickel transport system substrate-binding protein/oligopeptide transport system substrate-binding protein.
 
 
 
0.814
SDL47127.1
Peptide/nickel transport system permease protein/oligopeptide transport system permease protein.
 0.811
SDL75473.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.791
SDL38038.1
Peptide/nickel transport system permease protein.
 0.768
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.