STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL38630.1Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (341 aa)    
Predicted Functional Partners:
SDL38602.1
Simple sugar transport system ATP-binding protein.
  0.972
SDL38580.1
Simple sugar transport system substrate-binding protein.
  0.956
SDK91008.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
  0.917
SDK92917.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
  0.888
SDK92898.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
  0.884
SDK92933.1
Simple sugar transport system ATP-binding protein.
 
  0.882
rbsA
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
  0.870
rbsA-2
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
  0.867
SDL50704.1
D-xylose transport system ATP-binding protein.
 0.861
SDL61586.1
Putative multiple sugar transport system ATP-binding protein.
 
  0.837
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.