STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL40267.1GDSL-like Lipase/Acylhydrolase family protein. (266 aa)    
Predicted Functional Partners:
SDK83052.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family.
  
 0.614
SDK88865.1
Endoglucanase.
  
 0.614
SDL73520.1
Cellulose binding domain-containing protein.
  
 0.614
SDL49208.1
Mannan endo-1,4-beta-mannosidase.
   
  0.591
SDL45217.1
Cellulose binding domain-containing protein.
  
  0.573
SDL76237.1
Endo-1,4-beta-xylanase (glycosyl hydrolase family 10).
  
  0.573
SDL09177.1
Cysteine dioxygenase type I.
  
     0.555
SDK54011.1
Uncharacterised Sugar-binding Domain.
  
  0.529
SDK69757.1
DNA-binding transcriptional activator of the SARP family.
  
     0.486
SDL81266.1
Hypothetical protein.
  
 
   0.483
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.