STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL44879.1Metallo-beta-lactamase superfamily protein. (335 aa)    
Predicted Functional Partners:
SDL01066.1
Adenylyltransferase and sulfurtransferase.
  
 0.841
SDL18327.1
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component.
   
 0.830
SDK86376.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
   
 
  0.807
SDL66455.1
D-specific alpha-keto acid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
 0.660
SDK70034.1
Sugar or nucleoside kinase, ribokinase family.
  
    0.604
SDK83883.1
Transcriptional regulator, PadR family.
  
     0.549
SDL66977.1
Rhodanese-related sulfurtransferase.
  
 0.528
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
    
 
 0.487
SDL44851.1
MFS transporter, DHA1 family, inner membrane transport protein.
       0.481
ybeY
Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
 
 0.468
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.