STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL48336.1Chitin-binding protein. (352 aa)    
Predicted Functional Partners:
SDL02155.1
Cellulose 1,4-beta-cellobiosidase; Belongs to the glycosyl hydrolase family 6.
  
     0.755
SDL46695.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
  
  
 0.750
SDL08812.1
Cellulose 1,4-beta-cellobiosidase.
  
     0.734
SDL16950.1
Lysophospholipase L1.
  
     0.698
SDK82409.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
  
 0.664
SDK92446.1
Ricin-type beta-trefoil lectin domain-like.
  
     0.649
SDL08193.1
Lysophospholipase L1.
  
     0.645
SDL23862.1
Endoglucanase; Belongs to the glycosyl hydrolase family 6.
  
     0.644
SDL16414.1
Cellulose binding domain-containing protein.
  
     0.631
SDL82057.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
  
 0.620
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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