STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL48467.1Protein of unknown function. (159 aa)    
Predicted Functional Partners:
SDL48397.1
ATP-dependent DNA helicase RecG.
 
     0.758
SDL48420.1
Protein of unknown function.
       0.662
dut
dUTP pyrophosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.662
SDL38405.1
Chorismate mutase.
  
     0.640
SDL76866.1
Transcriptional regulator, TetR family.
  
     0.607
SDL48819.1
Hypothetical protein.
  
     0.600
SDL49127.1
Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase.
  
     0.598
SDK82595.1
Protein ImuB.
  
     0.586
SDL46916.1
Cytochrome c oxidase subunit IV.
  
     0.579
SDL38714.1
Protein of unknown function.
  
     0.566
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.