STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL54096.1ATP-binding cassette, subfamily B. (590 aa)    
Predicted Functional Partners:
SDL75778.1
ATP-binding cassette, subfamily C, CydD/ATP-binding cassette, subfamily C, CydCD.
 
    
0.904
SDL47075.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.898
SDL83481.1
NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains.
 
 
    0.896
SDK89560.1
Peptide/nickel transport system ATP-binding protein.
 
     
0.877
SDL07466.1
Putative ABC transport system ATP-binding protein.
 
    
0.846
SDL40179.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
     
0.827
SDL38089.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.823
SDL21193.1
Putative ABC transport system ATP-binding protein.
 
     
0.795
SDL73010.1
Tetratricopeptide (TPR) repeat.
    
  0.712
SDL34842.1
Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.654
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
Server load: low (18%) [HD]