STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL62524.1Hypothetical protein. (268 aa)    
Predicted Functional Partners:
SDL62556.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
 
 
 
 0.997
SDL62542.1
Succinate dehydrogenase / fumarate reductase flavoprotein subunit.
 
 
 
 0.992
SDK85453.1
Succinate dehydrogenase subunit B.
   
 
 0.950
SDK85470.1
Succinate dehydrogenase subunit A.
   
 
 0.866
mshB
N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway.
       0.518
SDK67724.1
UDP-MurNAc hydroxylase.
  
     0.460
SDL84436.1
FAD dependent oxidoreductase.
   
   0.448
SDL84646.1
FAD dependent oxidoreductase.
   
   0.448
SDK89037.1
FAD dependent oxidoreductase.
   
   0.448
SDL62486.1
Putative Mg2+ transporter-C (MgtC) family protein.
       0.440
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.