STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL69253.1Glycosyl transferase family 2. (236 aa)    
Predicted Functional Partners:
SDK78373.1
Dolichol-phosphate mannosyltransferase.
  
  
 
0.756
SDL69267.1
Hypothetical protein.
  
 
  0.632
SDL06676.1
dTDP-glucose 4,6-dehydratase.
 
  
 0.567
SDL06686.1
Undecaprenyl-phosphate galactose phosphotransferase, WbaP/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.497
SDL50584.1
Undecaprenyl-phosphate galactose phosphotransferase, WbaP/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.474
SDL23811.1
Response regulator receiver modulated diguanylate cyclase.
  
     0.468
SDL03245.1
ABC-2 type transport system ATP-binding protein.
 
    0.466
SDL05873.1
ABC-type polysaccharide/polyol phosphate export permease.
  
    0.436
SDL22402.1
dTDP-L-rhamnose 4-epimerase.
  
  
 0.417
dcd
dCTP deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate.
       0.417
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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