STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL74959.1Two-component system, LytT family, sensor kinase. (352 aa)    
Predicted Functional Partners:
SDL74983.1
Two component transcriptional regulator, LytTR family.
 0.994
SDL75018.1
Cation/acetate symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.910
SDL74999.1
Uncharacterized membrane protein, DUF485 family.
       0.727
SDL74925.1
Uncharacterized membrane protein, DUF485 family.
 
     0.710
SDL74946.1
Cation/acetate symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.688
SDL05266.1
Two-component system, OmpR family, sensor histidine kinase SenX3.
 
    
 0.673
SDL09110.1
Signal transduction histidine kinase.
   
 
 0.500
SDL58501.1
Two-component system, OmpR family, sensor kinase.
 
 
    0.492
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.