STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL75758.1Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein. (337 aa)    
Predicted Functional Partners:
SDL75742.1
Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein.
 
 0.999
SDL51122.1
Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein.
 
 0.998
SDL75778.1
ATP-binding cassette, subfamily C, CydD/ATP-binding cassette, subfamily C, CydCD.
 
     0.944
SDL75796.1
ATP-binding cassette, subfamily C, CydC/ATP-binding cassette, subfamily C, CydCD.
 
     0.938
SDK85470.1
Succinate dehydrogenase subunit A.
     
 0.620
SDL62542.1
Succinate dehydrogenase / fumarate reductase flavoprotein subunit.
     
 0.620
SDK85453.1
Succinate dehydrogenase subunit B.
     
 0.571
SDL62556.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
     
 0.571
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.504
SDL75708.1
ElaA protein.
       0.486
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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