STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL77161.1Hypothetical protein. (147 aa)    
Predicted Functional Partners:
SDL35285.1
2'-5' RNA ligase.
  
     0.618
SDK60981.1
Streptomyces sporulation and cell division protein, SsgA.
  
     0.591
SDL68185.1
Ribosomal protein S18 acetylase RimI.
  
     0.590
SDK82622.1
Hypothetical protein.
 
     0.503
SDK63448.1
Methyltransferase domain-containing protein.
 
     0.473
SDK77938.1
Putative RecB family exonuclease.
  
     0.469
SDL68435.1
DNA-binding transcriptional regulator, PadR family.
  
     0.461
rbpA-2
RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.456
SDK82230.1
4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family.
  
     0.455
SDL74657.1
Cobalamin-independent synthase, Catalytic domain.
  
     0.450
Your Current Organism:
Glycomyces sambucus
NCBI taxonomy Id: 380244
Other names: CGMCC 4.3147, DSM 45047, G. sambucus, Glycomyces sambucus Gu et al. 2007, Glycomyces sp. E71, JCM 15472, strain E71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.